Items where Division is "Computational BioMedicine"

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Aghajani, Marra Jai and Yang, Tao and Schmitz, Ulf and James, Alexander and McCafferty, Charles Eugenio and de Souza, Paul and Niles, Navin and Roberts, Tara L Epithelial-to-mesenchymal transition and its association with PD-L1 and CD8 in thyroid cancer. Endocrine Connections (2020), 9 (10) pp. 1028-1041. ISSN 2049-3614

Alharbi, Adel B and Schmitz, Ulf and Marshall, Amy D and Vanichkina, Darya and Nagarajah, Rajini and Vellozzi, Melissa and Wong, Justin JL and Bailey, Charles G and Rasko, John EJ Ctcf haploinsufficiency mediates intron retention in a tissue-specific manner. RNA Biology (2020), pp. 1-11. ISSN 1547-6286

Amirkhah, Raheleh and Naderi-Meshkin, Hojjat and Shah, Jaynish and Dunne, Philip and Schmitz, Ulf The Intricate Interplay between Epigenetic Events, Alternative Splicing and Noncoding RNA Deregulation in Colorectal Cancer. Cells (2019), 8 (8) p. 929. ISSN 2073-4409

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Lai, Xin and Eberhardt, Martin and Schmitz, Ulf and Vera, Julio Systems biology-based investigation of cooperating microRNAs as monotherapy or adjuvant therapy in cancer. Nucleic Acids Research (2019), 47 (15) pp. 7753-7766. ISSN 0305-1048

Lai, Xin and Gupta, Shailendra K and Schmitz, Ulf and Marquardt, Stephan and Knoll, Susanne and Spitschak, Alf and Wolkenhauer, Olaf and Pützer, Brigitte M and Vera, Julio MiR-205-5p and miR-342-3p cooperate in the repression of the E2F1 transcription factor in the context of anticancer chemotherapy resistance. Theranostics (2018), 8 (4) pp. 1106-1120. ISSN 1838-7640

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Monteuuis, Geoffray and Schmitz, Ulf and Petrova, Veronika and Kearney, Padraic S. and Rasko, John E.J. Holding on to Junk Bonds: Intron Retention in Cancer and Therapy. [Review]

Monteuuis, Geoffray and Wong, Justin J L and Bailey, Charles G and Schmitz, Ulf and Rasko, John E J The changing paradigm of intron retention: regulation, ramifications and recipes. Nucleic Acids Research (2019), 47 (22) ISSN 0305-1048

Monteuuis, Geoffray and Wong, Justin J L and Bailey, Charles G and Schmitz, Ulf and Rasko, John E J The changing paradigm of intron retention: regulation, ramifications and recipes. Nucleic Acids Research (2019), ISSN 0305-1048

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Naderi-Meshkin, Hojjat and Lai, Xin and Amirkhah, Raheleh and Vera, Julio and Rasko, John E J and Schmitz, Ulf and Wren, Jonathan Exosomal lncRNAs and cancer: connecting the missing links. Bioinformatics (2018), 35 (2) pp. 352-360. ISSN 1367-4803

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Petrova, Veronika and Song, Renhua and Nordström, Karl J V and Walter, Jörn and Wong, Justin J L and Armstrong, Nicola J and Rasko, John E J and Schmitz, Ulf Increased chromatin accessibility facilitates intron retention in specific cell differentiation states. Nucleic Acids Research (2022), 50 (20) pp. 11563-11579. ISSN 0305-1048

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Rajasekhar, Megha and Schmitz, Ulf and Flamant, Stephane and Wong, Justin J.-L. and Bailey, Charles G. and Ritchie, William and Holst, Jeff and Rasko, John E. J. Identifying microRNA determinants of human myelopoiesis. Scientific Reports (2018), 8 (1) ISSN 2045-2322

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Shah, Jaynish S. and Milevskiy, Michael J. G. and Petrova, Veronika and Au, Amy Y. M. and Wong, Justin J. L. and Visvader, Jane E. and Schmitz, Ulf and Rasko, John E. J. Towards resolution of the intron retention paradox in breast cancer. Breast Cancer Research (2022), 24 (1) ISSN 1465-542X

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Wong, Justin J-L and Rasko, John E J and Hayashi, Rippei and Larance, Mark and Schmitz, Ulf and Roediger, Ben and Clark, Susan J and Nair, Shalima S and Wong, Alex C H and Kwok, Chau-To and Halstead, James M and Lee, Quintin and Song, Renhua and Pinello, Natalia and Green, Immanuel D Macrophage development and activation involve coordinated intron retention in key inflammatory regulators. Nucleic Acids Research (2020), 48 (12) pp. 6513-6529. ISSN 0305-1048